Research Data
Data Publication
New 2D-to-3D Reconstruction of Heterogenous Porous Media via Deep Generative Adversarial Networks (GANs)
Hannah Vogel | Hamed Amiri
Utrecht University
(2024)
Descriptions
We imaged samples of Berea sandstone from Ohio (USA) using two 2D imaging techniques, backscattered electron (BSE) and optical microscopy, as well as one 3D imaging technique, X-ray (micro-)computed tomography (XCT). The goal is to employ a deep-learning-based generative model called a generative adversarial network (GAN) to reconstruct statistically equivalent microstructures in 3D from exclusively 2D training images. To evaluate the reconstruction accuracy, we conduct a visual and statistical analysis comparing reconstructions with a 3D X-ray tomography of the same sample. Our method uniquely uses true 2D images from three orthogonally oriented planes for training the model. The data are organized into 13 folders: three contain the original segmented (binary) images of Berea sandstone samples, and the other 10 folders contain data and individual figures used to create figures in the main publication. Link to GitHub containing codes: https://github.com/hamediut/2D-to3D-recon
Keywords
Originally assigned keywords
Microscopy and tomography data
sandstone
metamorphic_rock
serpentinite
Scanning Electrone Microscope
Optical Microscope
Permeability
2D-to-3D reconstructions
image reconstruction
microstructural quantification
generative adversarial network (GAN)
heterogenous microstructures
porous media
statistically-equivalent microstructures
backscattered electron microscopy
scanning electron microscopy
X-ray tomography
optical microscopy
Micro-CT
deep learning (DL)
artificial intelligence (AI)
Berea sandstone
Link to GitHub containing codes: https://github.com/hamediut/2D-to3D-recon
Corresponding MSL vocabulary keywords
sandstone
serpentinite
scanning electron microscope (SEM)
optical microscopy
permeability
backscatter electron (BSE) imaging
X-ray tomography
computed tomography (CT)
Berea sandstone
MSL enriched keywords
sedimentary rock
sandstone
metamorphic rock
serpentinite
Apparatus
electron microscopy
scanning electron microscope (SEM)
optical microscopy
Measured property
permeability
Technique
imaging (2D)
backscatter electron (BSE) imaging
X-ray tomography
imaging (3D)
computed tomography (CT)
wacke
Berea sandstone
Metadata
MSL enriched sub domains
microscopy and tomography
rock and melt physics
Resource Type
Source publisher
| Utrecht University |
DOI
| 10.24416/uu01-afp38o |
Creators
| Hannah Vogel |
| Personal |
| Utrecht University |
| Hamed Amiri |
| Personal |
| Utrecht University |
Contributors
| Vogel, Hannah |
| Personal |
| Utrecht University |
| Amiri, Hamed |
| Personal |
| Utrecht University |
| Personal |
| Utrecht University |
Citation
Vogel, H., & Amiri, H. (2024). New 2D-to-3D Reconstruction of Heterogenous Porous Media via Deep Generative Adversarial Networks (GANs) (Version 1.1) [Data set]. Utrecht University. https://doi.org/10.24416/UU01-AFP38O
References
Dates
| Issued | 2024-07-16T10:31:03 |
| Updated | 2026-02-04T11:22:27 |
| Collected | 2022-03-01/2024-05-14 |
Language
en
Funding References
| Funder Name | European Research Council |
| Funder Name | NWO |
Rights
| Name | Open - freely retrievable |
| URI | info:eu-repo/semantics/openAccess |
| Name | Creative Commons Attribution 4.0 International |
| URI | https://creativecommons.org/licenses/by/4.0/legalcode |
| Identifier | cc-by-4.0 |
| Identifier Scheme | SPDX |
| Scheme URI | https://spdx.org/licenses/ |
Locations
Geo location(s)
Berea sandstone
Meta-igneous rock
Serpentinite